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Fluidize

Python PyPI License Documentation

About

fluidize-python is a library for building modular, reproducible scientific computing pipelines. It provides a unified interface to a wide range of physical simulation tools, eliminating the need to navigate the inconsistent, incomplete instructions that often vary from tool to tool.

This library marks our first step toward AI-orchestrated scientific computing. By standardizing tools and practices within our framework, AI agents can automatically build, configure, and execute computational pipelines across domains and simulation platforms.

Our goal is to improve today’s simulation tools so AI can assist researchers and scientists in accelerating the pace of innovation and scientific discovery.

Installation

Prerequesites:

  • Python 3.9+
  • Docker Desktop (for local execution). Download and install Docker Desktop from https://docs.docker.com/desktop/.

After installation, verify with: bash docker --version

From PyPI

pip install fluidize

From Source

git clone https://github.com/Fluidize-Inc/fluidize-python.git
cd fluidize-python
make install

Run Examples

Example projects are located in this folder: examples/. There you can find an Jupyter Notebook of a simple simulation

Architecture

At Fluidize, we believe strong organization leads to better reproducibility and scalability.

We treat each simulation pipeline as an individual project. Within projects, each pipeline is treated as a DAG (directed acyclic graph), where nodes represent individual pieces of scientific software (e.g. inputs, solvers, visualization tools, etc.) and edges represent data flow between nodes.

Nodes

Nodes are the foundational building blocks of simulation pipelines. Each node represents a computational unit with:

File Purpose
properties.yaml Container configuration, working directory, and output paths
metadata.yaml Node description, version, authors, and repository URL
Dockerfile Environment setup and dependency installation
parameters.json Tunable parameters for experiments
main.sh Execution script for the source code
source/ Original scientific computing code

Key Features:
- Predictable input/output paths
- Modular and extensible design
- No source code modification required
- Automated node generation support (Public launch soon)

Projects

Projects store a simple data layer for managing individual modules within a pipeline.

File Purpose
graph.json Node (scientific software) and edge (data flow) definitions
metadata.yaml Project description and configuration

Runs

Pipelines can be executed both locally and on the cloud. Local execution is handled by Docker engine. Cloud execution is routed through our API, and uses the Kubernetes engine with Argo Workflow Manager.

Contributing

We would love to collaborate with you! Please see our Contributing Guide for details.

Also - we would love to help streamline your pipeline! Please reach out to us at founders@fluidize.ai.

License

This project is licensed under the MIT License - see the LICENSE file for details.